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Saint: A Lightweight Integration Environment for Model Annotation

Lookup NU author(s): Dr Allyson Lister, Dr Matthew Pocock, Morgan Taschuk, Professor Anil Wipat

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Abstract

SUMMARY: Saint is a web application which provides a lightweight annotation integration environment for quantitative biological models. The system enables modellers to rapidly mark up models with biological information derived from a range of data sources. Availability and Implementation: Saint is freely available for use on the web at http://www.cisban.ac.uk/saint. The web application is implemented in GoogleWeb Toolkit and Tomcat, with all major browsers supported. The Java source code is freely available for download at http://saint-annotate.sourceforge.net. The Saint web server requires an installation of libSBML and has been tested on Linux (32-bit Ubuntu 8.10 and 9.04). CONTACT: helpdesk@cisban.ac.uk SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.

Publication metadata

Author(s): Lister AL, Pocock M, Taschuk M, Wipat A

Publication type: Article

Publication status: Published

Journal: Bioinformatics

Year: 2009

Volume: 25

Issue: 22

Pages: 3026-3027

Date deposited: 20/11/2009

ISSN (print): 1367-4803

ISSN (electronic): 1367-4811

Publisher: Oxford University Press

URL: http://dx.doi.org/10.1093/bioinformatics/btp523

DOI: 10.1093/bioinformatics/btp523

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